msmtools.flux.total_flux¶

msmtools.flux.
total_flux
(F, A=None)¶  Compute the total flux, or turnover flux, that is produced by
 the flux sources and consumed by the flux sinks.
Parameters:  F ((M, M) ndarray) – Matrix of flux values between pairs of states.
 A (array_like (optional)) – List of integer state labels for set A (reactant)
Returns: F – The total flux, or turnover flux, that is produced by the flux sources and consumed by the flux sinks
Return type: float
References
[1] P. Metzner, C. Schuette and E. VandenEijnden. Transition Path Theory for Markov Jump Processes. Multiscale Model Simul 7: 11921219 (2009)